Thirty-two functional (T2* weighted) and obviously anatomical (T1 weighted) oblique slice were acquired along the ac-pc plane (3 mm thick, no gap), covering the whole temporal lobe and most of the frontal lobe
(TR = 2500 msec, TE = 35 msec, flip angle = 90°, voxel size = 2.3 × 2.3 × 3 mm). In addition, selleck chem Imatinib Mesylate high-resolution anatomical images were acquired for each subject using fast spoiled gradient echo (SPGR) sequence. In-plane anatomical images were Inhibitors,research,lifescience,medical used to align the functional data with the high-resolution anatomical data, allowing volume-based statistical analyses of signal changes along time. Data analysis fMRI data were preprocessed, analyzed, and visualized using MATLAB (The Mathworks, Nattick, MA) and mrVista tools (http://white.stanford.edu/software). Individual subject analyses were applied at native space of each participant, without spatial smoothing, in order to maintain the high spatial resolution provided by MRI. The first five fMRI volume images of each run were excluded from analysis to ensure steady-state Inhibitors,research,lifescience,medical magnetization. General linear model (GLM) predictors were constructed to estimate the relative contribution of each condition to every Inhibitors,research,lifescience,medical voxel’s time course, using a boxcar function convolved with a
canonical hemodynamic response function (HRF). Spatial contrast maps were computed for each contrast of interest, based on voxel-wise t-tests between the weights of relevant predictors. Functional ROIs were selected by marking continuous clusters of voxels that passed the threshold of p < 10−3 (uncorrected) within anatomically Inhibitors,research,lifescience,medical defined borders, as detailed below. This threshold was equivalent to a false discovery rate (FDR) corrected
value of q < 0.1. ROIs were defined in left inferior frontal gyrus (LIFG), bilateral posterior superior temporal sulcus (pSTS), and bilateral anterior superior temporal sulcus (aSTS). The decision Inhibitors,research,lifescience,medical to focus on this particular set of ROIs was guided by numerous preceding studies of speech processing and current models of speech processing (e.g., Scott and Johnsrude 2003; Price et al. 2005; Friederici 2011 among many others), and by a general inspection of the individual data confirming the existence of consistent activation in these areas for speech versus rest. The anatomical Cilengitide borders of the ROIs were defined as follows: (a) IFG: pars opercularis and pars triangularis of the IFG; (b) pSTS: the posterior third of the superior temporal sulcus, including BA 39 bordering BA 37, BA 22; (c) aSTS: the anterior third of the STS, including BA 38 and the anterior part of BA 22, bordering BA 21. Mean cluster size was calculated by averaging the volumes of activated voxels within an ROI across all participants, considering null activation as zero. Time course data were collected from ROI voxels identified by Speech versus SCN contrast in the native in-plane slices to avoid smoothing and interpolation.